lammpi stable port information

Package: lammpi
Version: 7.1.4
Revision: 1002
GCC: 4.0
Description: MPI implementation for parallel computing
License: OSI-Approved
Maintainer: Jack Howarth
Distribution: 10.4, 10.5, 10.6
Depends: %N-shlibs (= %v-%r), gcc47-compiler
BuildDepends: fink (>= 0.24.12-1), gcc47-compiler, autoconf2.6
BuildConflicts: openmpi-dev
Source: http://www.lam-mpi.org/download/files/lam-%v.tar.bz2
Source-MD5: 3f9240327fae75b1de479ae3f3e2c31a
UseMaxBuildJobs: False
PatchFile: %n.patch
PatchFile-MD5: ae0dbacccf03b31bbcb724d75207e2f2
ConfigureParams: --prefix=%p --with-rsh="/usr/bin/ssh -x" --libexecdir=%p/lib/%n --datadir=%p/share/doc/%n --sysconfdir=%p/etc/%n --sharedstatedir=%p/var/%n/shared --localstatedir=%p/var/%n/local --libdir=%p/lib/%n --includedir=%p/include/%n --infodir=%p/share/info --mandir=%p/share/man/%n --with-trillium --enable-shared --enable-static --with-fc=%p/bin/gfortran-fsf-4.7 --disable-dependency-tracking FFLAGS=-O3
SetCC: gcc-fsf-4.7
SetCXX: g++-fsf-4.7
CompileScript: <<
#! /bin/sh -ev
if [ "%m" == "x86_64" ] ; then
FC=gfortran-fsf-4.7 ./configure %c --build=%m-apple-darwin`uname -r|cut -f1 -d.` --host=%m-apple-darwin`uname -r|cut -f1 -d.` --enable-tv-dll-force
else
FC=gfortran-fsf-4.7 ./configure %c
fi
<<
InstallScript: <<
#!/bin/sh -ev
make install DESTDIR=%d
mv %i/bin/mpic++ %i/bin/lam-mpic++
mv %i/bin/mpicc %i/bin/lam-mpicc
mv %i/bin/mpiexec %i/bin/lam-mpiexec
mv %i/bin/mpif77 %i/bin/lam-mpif77
mv %i/bin/mpirun %i/bin/lam-mpirun
ln -s %p/bin/lam-mpic++ %i/bin/mpic++
ln -s %p/bin/lam-mpicc %i/bin/mpicc
ln -s %p/bin/lam-mpif77 %i/bin/mpif77
make examples
mkdir -p %i/share/doc/lammpi
mv examples %i/share/doc/lammpi/
<<
DocFiles: AUTHORS HISTORY INSTALL LICENSE README VERSION
SplitOff: <<
Package: %N-shlibs
Replaces: %N (<= 7.0.6-1012)
Files: <<
lib/%N/lam/*.so
lib/%N/lib*.0.dylib
<<
Shlibs: <<
%p/lib/%N/liblam.0.dylib 1.0.0 %n (>= 7.1.2-1000)
%p/lib/%N/liblamf77mpi.0.dylib 1.0.0 %n (>= 7.1.2-1000)
%p/lib/%N/liblammpi++.0.dylib 1.0.0 %n (>= 7.1.2-1000)
%p/lib/%N/libmpi.0.dylib 1.0.0 %n (>= 7.1.2-1000)
<<
DocFiles: AUTHORS HISTORY INSTALL LICENSE README VERSION
Description: Shared libraries for lammpi package
<<
SplitOff2: <<
Package: %N-dev
Depends: %N (= %v-%r)
Conflicts: openmpi-dev
Replaces: %N (<= 7.0.6-1012), openmpi-dev
BuildDependsOnly: true
Files: <<
include/%N
lib/%N/*.dylib
lib/%N/lam/lib*.*a
lib/%N/lib*.*a
bin/mpic++
bin/mpicc
bin/mpif77
<<
DocFiles: AUTHORS HISTORY INSTALL LICENSE README VERSION
Description: Development files for lammpi package
<<
SplitOff3: <<
Package: %N-examples
Depends: %N (= %v-%r)
Files: share/doc/lammpi/examples
DocFiles: AUTHORS HISTORY INSTALL LICENSE README VERSION
Description: Example files for lammpi package
<<
DescDetail: <<
LAM (Local Area Multicomputer) is an MPI programming environment and
development system for heterogeneous computers on a network. With LAM, a
dedicated cluster or an existing network computing infrastructure can act
as one parallel computer solving one problem.

LAM features extensive debugging support in the application development
cycle and peak performance for production applications. LAM features a
full implementation of the MPI communication standard.
<<
DescPackaging: <<
Please Note: If you are on a case-insensitive file system (e.g. Mac HFS
Extended), your c++ wrapper compiler will be named mpic++. If on a case-
sensitive file system (e.g. UFS), your c++ wrapper compiler will be named
mpiCC. Builds with ROMIO, fortran, c++ and trillium support.
The include and library files have been placed in subdirectories named
"lammpi" to avoid file collisions with those from the openmpi packages.
Executables which collide with those in openmpi have been renamed
with an "lam-" prefix and symlinks provided to the original names
through the lammpi-dev package.
Package previously assembled and maintained by James Gibbs
<<
DescUsage: <<
The LAM-MPI system is started with the command...
lamboot -v ~/lamhosts
where the lamhosts file contants the boot schema for the available
processors and nodes.
<<

Homepage: http://www.lam-mpi.org

lammpi stable port .patch

--- lam-7.1.2/config/lam_memory_setup.m4.org 2006-07-07 22:31:19.000000000 -0400
+++ lam-7.1.2/config/lam_memory_setup.m4 2006-07-07 22:31:38.000000000 -0400
@@ -56,7 +56,7 @@
AC_DEFUN([LAM_DARWIN_MALLOC_SETUP],[
case "$host" in
*apple-darwin*)
- WRAPPER_EXTRA_LDFLAGS="-Wl,-u -Wl,_lam_darwin_malloc_linker_hack -Wl,-multiply_defined,suppress -Wl,-force_flat_namespace -Wl,-flat_namespace $WRAPPER_EXTRA_LDFLAGS"
+ WRAPPER_EXTRA_LDFLAGS="-Wl,-u -Wl,_lam_darwin_malloc_linker_hack -Wl,-multiply_defined,suppress -Wl,-flat_namespace $WRAPPER_EXTRA_LDFLAGS"
LDFLAGS="-Wl,-multiply_defined,suppress $LDFLAGS"
;;
*)


diff -uNr lam-7.1.3.org/otb/mpirun/mpirun.c lam-7.1.3/otb/mpirun/mpirun.c
--- lam-7.1.3.org/otb/mpirun/mpirun.c 2006-06-24 16:42:25.000000000 -0400
+++ lam-7.1.3/otb/mpirun/mpirun.c 2007-05-27 19:31:33.000000000 -0400
@@ -104,7 +104,12 @@
*/
extern struct kio_t _kio; /* kernel I/O block */
extern struct fclient _ufd[FUMAX]; /* user file desc. */
+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif

/*
* exported variables
diff -uNr lam-7.1.3.org/otb/sys/haltd/haltd.c lam-7.1.3/otb/sys/haltd/haltd.c
--- lam-7.1.3.org/otb/sys/haltd/haltd.c 2006-12-28 13:42:20.000000000 -0500
+++ lam-7.1.3/otb/sys/haltd/haltd.c 2007-05-27 19:32:26.000000000 -0400
@@ -44,7 +44,12 @@
/*
* Access the environment
*/
+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif

/*
* local variables
diff -uNr lam-7.1.3.org/otb/sys/kernel/kernelio.c lam-7.1.3/otb/sys/kernel/kernelio.c
--- lam-7.1.3.org/otb/sys/kernel/kernelio.c 2006-06-24 16:42:25.000000000 -0400
+++ lam-7.1.3/otb/sys/kernel/kernelio.c 2007-05-27 19:33:12.000000000 -0400
@@ -91,7 +91,12 @@
* external variables
*/
extern struct kproc *prun; /* current running client */
+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif

/*
* local variables
diff -uNr lam-7.1.3.org/share/boot/asc_parse.c lam-7.1.3/share/boot/asc_parse.c
--- lam-7.1.3.org/share/boot/asc_parse.c 2006-06-24 16:42:42.000000000 -0400
+++ lam-7.1.3/share/boot/asc_parse.c 2007-05-27 19:34:20.000000000 -0400
@@ -652,7 +652,12 @@
int
asc_environment(int exportme, char *varlist, char ***env)
{
+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ; /* current environment */
+# endif
char **p;
char *v;
int nenv;
diff -uNr lam-7.1.3.org/share/boot/hbootparse.c lam-7.1.3/share/boot/hbootparse.c
--- lam-7.1.3.org/share/boot/hbootparse.c 2006-06-24 16:42:42.000000000 -0400
+++ lam-7.1.3/share/boot/hbootparse.c 2007-05-27 19:35:13.000000000 -0400
@@ -33,7 +33,12 @@
#include
#include

+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif

static char *conffile;
static char **av_psc_path;
diff -uNr lam-7.1.3.org/share/ssi/boot/base/ssi_boot_find_boot_schema.c lam-7.1.3/share/ssi/boot/base/ssi_boot_find_boot_schema.c
--- lam-7.1.3.org/share/ssi/boot/base/ssi_boot_find_boot_schema.c 2006-06-24 16:42:36.000000000 -0400
+++ lam-7.1.3/share/ssi/boot/base/ssi_boot_find_boot_schema.c 2007-05-27 19:36:12.000000000 -0400
@@ -31,7 +31,12 @@
* Access the environment
*/

+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif



diff -uNr lam-7.1.3.org/share/ssi/boot/bproc/src/ssi_boot_bproc.c lam-7.1.3/share/ssi/boot/bproc/src/ssi_boot_bproc.c
--- lam-7.1.3.org/share/ssi/boot/bproc/src/ssi_boot_bproc.c 2006-06-24 16:42:36.000000000 -0400
+++ lam-7.1.3/share/ssi/boot/bproc/src/ssi_boot_bproc.c 2007-05-27 19:37:18.000000000 -0400
@@ -101,7 +101,12 @@
/*
* External variables
*/
+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif


int
diff -uNr lam-7.1.3.org/share/ssi/boot/globus/src/ssi_boot_globus.c lam-7.1.3/share/ssi/boot/globus/src/ssi_boot_globus.c
--- lam-7.1.3.org/share/ssi/boot/globus/src/ssi_boot_globus.c 2006-06-24 16:42:36.000000000 -0400
+++ lam-7.1.3/share/ssi/boot/globus/src/ssi_boot_globus.c 2007-05-27 19:38:32.000000000 -0400
@@ -42,7 +42,12 @@
/*
* Access the environment
*/
+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif


/*
diff -uNr lam-7.1.3.org/share/ssi/boot/tm/src/ssi_boot_tm.c lam-7.1.3/share/ssi/boot/tm/src/ssi_boot_tm.c
--- lam-7.1.3.org/share/ssi/boot/tm/src/ssi_boot_tm.c 2006-06-24 16:42:36.000000000 -0400
+++ lam-7.1.3/share/ssi/boot/tm/src/ssi_boot_tm.c 2007-05-27 19:39:20.000000000 -0400
@@ -82,7 +82,12 @@
/*
* External variables
*/
+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif


int
diff -uNr lam-7.1.3.org/share/ssi/crlam/base/ssi_crlam.c lam-7.1.3/share/ssi/crlam/base/ssi_crlam.c
--- lam-7.1.3.org/share/ssi/crlam/base/ssi_crlam.c 2006-06-24 16:42:42.000000000 -0400
+++ lam-7.1.3/share/ssi/crlam/base/ssi_crlam.c 2007-05-27 19:40:21.000000000 -0400
@@ -49,7 +49,12 @@
/*
* external variables
*/
+# ifdef __APPLE__
+# include
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif

#define signal_puts(S) write(STDOUT_FILENO, (S), strlen(S))

diff -uNr lam-7.1.3.org/tools/wrappers/wrap.cc lam-7.1.3/tools/wrappers/wrap.cc
--- lam-7.1.3.org/tools/wrappers/wrap.cc 2006-06-24 16:42:29.000000000 -0400
+++ lam-7.1.3/tools/wrappers/wrap.cc 2007-05-27 19:41:50.000000000 -0400
@@ -42,9 +42,17 @@
// External functions
//

+# ifdef __APPLE__
+# include
+# endif
+
extern "C" {
extern int cnfexec(char *argv[]);
+# ifdef __APPLE__
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif
}


diff -uNr lam-7.1.3.org/tools/wrappers/wrap_cc.cc lam-7.1.3/tools/wrappers/wrap_cc.cc
--- lam-7.1.3.org/tools/wrappers/wrap_cc.cc 2006-06-24 16:42:29.000000000 -0400
+++ lam-7.1.3/tools/wrappers/wrap_cc.cc 2007-05-27 19:42:52.000000000 -0400
@@ -42,9 +42,17 @@
// External functions
//

+# ifdef __APPLE__
+# include
+# endif
+
extern "C" {
extern int cnfexec(char *argv[]);
+# ifdef __APPLE__
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif
}


diff -uNr lam-7.1.3.org/tools/wrappers/wrap_cxx.cc lam-7.1.3/tools/wrappers/wrap_cxx.cc
--- lam-7.1.3.org/tools/wrappers/wrap_cxx.cc 2006-06-24 16:42:29.000000000 -0400
+++ lam-7.1.3/tools/wrappers/wrap_cxx.cc 2007-05-27 19:43:48.000000000 -0400
@@ -42,9 +42,17 @@
// External functions
//

+# ifdef __APPLE__
+# include
+# endif
+
extern "C" {
extern int cnfexec(char *argv[]);
+# ifdef __APPLE__
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif
}


diff -uNr lam-7.1.3.org/tools/wrappers/wrap_f77.cc lam-7.1.3/tools/wrappers/wrap_f77.cc
--- lam-7.1.3.org/tools/wrappers/wrap_f77.cc 2006-06-24 16:42:29.000000000 -0400
+++ lam-7.1.3/tools/wrappers/wrap_f77.cc 2007-05-27 19:44:55.000000000 -0400
@@ -42,9 +42,17 @@
// External functions
//

+# ifdef __APPLE__
+# include
+# endif
+
extern "C" {
extern int cnfexec(char *argv[]);
+# ifdef __APPLE__
+# define environ (*_NSGetEnviron())
+# else
extern char **environ;
+# endif
}


--- lam-7.1.4-rh1/config/lam_check_prefix_memcpy.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/lam_check_prefix_memcpy.m4 2008-06-24 20:16:47.000000000 -0400
@@ -28,7 +28,7 @@ AC_MSG_CHECKING([for glibc])
AC_TRY_RUN([
#include

-int main(int argc, char* argv[])
+int main(int argc, char** argv)
{
FILE *fp = fopen("configtest.out", "w");
#ifdef __GLIBC__
--- lam-7.1.4-rh1/config/lam_check_bsd43_fd_passing.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/lam_check_bsd43_fd_passing.m4 2008-06-24 20:16:47.000000000 -0400
@@ -76,7 +76,7 @@ LAM_TRY_RUN_FD_PASSING([#include pid_t child_pid = 0;

int
-main(int argc, char *argv[])
+main(int argc, char **argv)
{
int fd[2];
int status = 0;
--- lam-7.1.4-rh1/config/lam_get_shmmax.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/lam_get_shmmax.m4 2008-06-24 20:16:47.000000000 -0400
@@ -44,7 +44,7 @@ test_alloc(int size)
return(1);
}
int
-main(int argc, char* argv[])
+main(int argc, char** argv)
{
int poolsize, maxalloc;
FILE *f=fopen("conftestval", "w");
--- lam-7.1.4-rh1/config/cxx_find_template_repository.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/cxx_find_template_repository.m4 2008-06-24 20:16:47.000000000 -0400
@@ -82,7 +82,7 @@ foo::member(int i)
}

int
-main(int argc, char *argv[])
+main(int argc, char **argv)
{
foo var1(6);
foo< foo > var2(var1);
--- lam-7.1.4-rh1/config/lam_check_pthread_pids.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/lam_check_pthread_pids.m4 2008-06-24 20:16:47.000000000 -0400
@@ -44,7 +44,7 @@ AC_TRY_RUN([#include
#include
#include
void *checkpid(void *arg);
-int main(int argc, char* argv[]) {
+int main(int argc, char** argv) {
pthread_t thr;
int pid, retval;
pid = getpid();
--- lam-7.1.4-rh1/config/lam_check_stdc.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/lam_check_stdc.m4 2008-06-24 20:16:47.000000000 -0400
@@ -23,7 +23,7 @@ cat > conftest.c < extern "C" {
void exit(int);
#endif
-int main(int argc, char* argv[])
+int main(int argc, char** argv)
{
FILE *f=fopen("conftestval", "w");
#ifndef __STDC__
--- lam-7.1.4-rh1/config/lam_get_alignment.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/lam_get_alignment.m4 2008-06-24 20:16:47.000000000 -0400
@@ -24,7 +24,7 @@ AC_TRY_RUN([
#include

struct foo { char c; $1 x; };
-int main(int argc, char* argv[])
+int main(int argc, char** argv)
{
struct foo *p = (struct foo *) malloc(sizeof(struct foo));
int diff;
--- lam-7.1.4-rh1/config/cxx_have_nothrow_new.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/cxx_have_nothrow_new.m4 2008-06-24 20:16:47.000000000 -0400
@@ -37,7 +37,7 @@ rm -f conftest.cc conftest.o
cat > conftest.cc < #include

-int main(int argc, char* argv[]) {
+int main(int argc, char** argv) {
int *baz;
unsigned int foo = 3;
baz = new(std::nothrow) int;
--- lam-7.1.4-rh1/config/lam_mutex_pshared.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/lam_mutex_pshared.m4 2008-06-24 20:16:47.000000000 -0400
@@ -17,7 +17,7 @@ dnl
define(LAM_MUTEX_PSHARED,[
AC_MSG_CHECKING(for process shared pthread mutex)
AC_TRY_RUN([#include
-int main(int argc, char* argv[]) {
+int main(int argc, char** argv) {
pthread_mutex_t m; pthread_mutexattr_t mattr;
if (pthread_mutexattr_init(&mattr)) return(1);
if (pthread_mutexattr_setpshared(&mattr, PTHREAD_PROCESS_SHARED)) return(1);
--- lam-7.1.4-rh1/config/lam_check_fd_setsize.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/lam_check_fd_setsize.m4 2008-06-24 20:16:47.000000000 -0400
@@ -86,7 +86,7 @@ if test ! "$LAM_FD_SETSIZE" = "0" ; then
#include
#include
int
-main(int argc, char* argv[])
+main(int argc, char** argv)
{
int fd = 0;
struct rlimit rlp;
@@ -135,7 +135,7 @@ if test ! "$LAM_FD_SETSIZE" = "0"; then
#include
#endif
int
-main(int argc, char* argv[])
+main(int argc, char** argv)
{
int ret;
fd_set fds;
--- lam-7.1.4-rh1/config/lam_wrapper_extra_ldflags.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/lam_wrapper_extra_ldflags.m4 2008-06-24 20:16:47.000000000 -0400
@@ -75,7 +75,7 @@ int foo(void) { return 1; }
EOF
cat > conftest.c < extern int foo(void);
-int main(int argc, char* argv[]) { return foo(); }
+int main(int argc, char** argv) { return foo(); }
EOF

../libtool --mode=compile $CC foo.c -o foo.lo -c > /dev/null 2>&1
--- lam-7.1.4-rh1/config/cxx_have_bool.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/cxx_have_bool.m4 2008-06-24 20:16:47.000000000 -0400
@@ -42,7 +42,7 @@ cat > conftest.cc < #include
#include

-int main(int argc, char* argv[]) {
+int main(int argc, char** argv) {
bool foo = (bool) 0;
printf("so foo is used and the compiler wont complain: %d", (int) foo);
return 0;
--- lam-7.1.4-rh1/config/cxx_have_true_false.m4.gcc43 2006-06-24 16:42:44.000000000 -0400
+++ lam-7.1.4-rh1/config/cxx_have_true_false.m4 2008-06-24 20:16:47.000000000 -0400
@@ -41,7 +41,7 @@ cat > conftest.cc < #include
#include

-int main(int argc, char* argv[]) {
+int main(int argc, char** argv) {
int foo;
foo = (int) true;
foo = (int) false;

lammpi _unstable_ port .patch