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Package: rnabob
Version: 2.2
Revision: 1
Source: http://selab.janelia.org/software/rnabob/%n-%v.tar.gz
Source-MD5: 6926d8097acbef99df1f55f73d53d68b
SourceDirectory: %n-%v
PatchScript: <<
#!/bin/tcsh -ev
cp Makefile Makefile-dist
grep -v HOME Makefile-dist > junk1
echo 'BINDIR="%i"/bin' > Makefile
echo 'MANDIR="%i"/share/man' >> Makefile
cat junk1 >> Makefile
rm -f junk1
perl -pi -e 's|getline|getline2|g' *.c
<<
CompileScript: <<
make
<<
InstallScript: <<
mkdir -p %i/bin
mkdir -p %i/share/man/man1
make install
<<
DOCFILES: COPYING GNULICENSE README rnabob.ps
Description: Fast RNA motif/pattern searcher
DescDetail: <<
RNABOB is an implementation of D. Gautheret\'s RNAMOT, but with a different
underlying algorithm using a nondeterministic finite state machine with
node rewriting rules. Useful for finding an RNA motif that fits a hard
consensus pattern.
<<
License: GPL
Maintainer: W. G. Scott