rnamotif stable port information

Package: rnamotif
Version: 3.0.4
Revision: 2
Source: http://www.scripps.edu/case/%n-%v.tar.gz
SourceDirectory: %n-%v
Source-MD5: 76b603bec11554c81a4cc3cd81f1b9cd
UseMaxBuildJobs: false
CompileScript: <<
perl -pi -e 's|/usr/local|%p|g' config.h
perl -pi -e 's|%p/bin/bison|/usr/bin/bison|g' config.h
perl -pi -e 's|#include ||g' src/*.c
make
rm -f src/*.o
<<
InstallScript: <<
mkdir -p %i/share
mkdir -p %i/share/%n
cp -R * %i/share/%n/.
mkdir -p %i/bin
ln -s %p/share/%n/src/rnamotif %i/bin/rnamotif
ln -s %p/share/%n/src/rmfmt %i/bin/rmfmt
ln -s %p/share/%n/src/rmprune %i/bin/rmprune
ln -s %p/share/%n/src/rm2ct %i/bin/rm2ct
mkdir -p %i/share/doc
mkdir -p %i/share/doc/%n
<<
RunTimeVars: <<
EFNDATA: %p/share/%n/efndata
<<
Description: RNA search for secondary structure motifs
DescDetail: <<
The rnamotif program searches a database for RNA sequences that match
a "motif" describing secondary structure interactions. A match means that
the given sequence is capable of adopting the given secondary structure,
but is not intended to be predictive. Matches can be ranked by applying
scoring rules that may provide finer distinctions than just matching to
a profile. The rnamotif program is a (significant) extension of earlier
programs rnamot and rnabob. The nearest-neighbor energies used in
the scoring section are based on Turner's rules. The code was written by
Tom Macke; Tom Macke and Dave Case wrote the Users' manual.
See home page for additional info and literature references.

There are four binaries:

rnamotif The actual serach program.
rmprune Remove hits that differ only by 'unzipped' base pairs.
rmfmt Format the output.
rm2ct Convert the output to ct-format suitable for drawing.

Usage is described in the README file
<<
DocFiles: README COPYING.GNU doc/%n.pdf
Homepage: http://www.scripps.edu/case/
License: GPL
Maintainer: W. G. Scott